Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Carlr-201ENSMUST00000181515 2574 ntBASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh17E9PXF0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm11918-201ENSMUST00000121660 179 ntBASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm43433-201ENSMUST00000196573 481 ntBASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm43438-201ENSMUST00000198133 379 ntBASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm5425-201ENSMUST00000214125 459 ntBASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh17E9PXF0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms