Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm13015-201ENSMUST00000118674 204 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm28923-201ENSMUST00000187755 322 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm5878E9PUB3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Gm37714-201ENSMUST00000194742 342 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 AC153936.1-201ENSMUST00000219874 395 ntBASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Gm5878E9PUB3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm5878E9PUB3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms