Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Gm28043E0CXC2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gm28043E0CXC2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.18
Gm28043E0CXC2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gm28043E0CXC2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gm28043E0CXC2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Gm13365-201ENSMUST00000121188 973 ntBASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Gm18889-201ENSMUST00000174284 929 ntBASIC13.95□□□□□ -0.18
Gm28043E0CXC2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm28043E0CXC2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Gm6736-201ENSMUST00000166583 948 ntBASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Gm27702-201ENSMUST00000184512 56 ntBASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Gm37230-201ENSMUST00000194491 818 ntBASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm28043E0CXC2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gm28043E0CXC2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms