Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm37489-201ENSMUST00000191883 159 ntBASIC14□□□□□ -0.17
Col4a6B1AVK5 Gm19163-201ENSMUST00000223313 780 ntBASIC14□□□□□ -0.17
Col4a6B1AVK5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14□□□□□ -0.17
Col4a6B1AVK5 Morn2-202ENSMUST00000227729 656 ntBASIC14□□□□□ -0.17
Col4a6B1AVK5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Col4a6B1AVK5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gm13316-201ENSMUST00000140537 691 ntBASIC13.99□□□□□ -0.17
Col4a6B1AVK5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.99□□□□□ -0.17
Col4a6B1AVK5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Mospd4-201ENSMUST00000180618 576 ntBASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.98□□□□□ -0.17
Col4a6B1AVK5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Rps4l-202ENSMUST00000204242 789 ntBASIC13.98□□□□□ -0.17
Col4a6B1AVK5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col4a6B1AVK5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Gm26185-201ENSMUST00000157692 266 ntBASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms