Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Mir5132-201ENSMUST00000175166 71 ntBASIC11.71□□□□□ -0.54
Col6a4A2AX52 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a4A2AX52 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm15808-201ENSMUST00000119046 604 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm6152-201ENSMUST00000151704 340 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm15957-201ENSMUST00000118893 974 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm29127-201ENSMUST00000188304 517 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm6013-201ENSMUST00000212264 699 ntBASIC11.7□□□□□ -0.54
Col6a4A2AX52 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a4A2AX52 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm12485-201ENSMUST00000119641 291 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm44364-201ENSMUST00000198368 141 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms