Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.46□□□□□ -0.09
Scn1aA2APX8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.46□□□□□ -0.09
Scn1aA2APX8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn1aA2APX8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Gm11803-201ENSMUST00000119966 444 ntBASIC14.46□□□□□ -0.1
Scn1aA2APX8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.46□□□□□ -0.1
Scn1aA2APX8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn1aA2APX8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm9002-201ENSMUST00000178437 499 ntBASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm6244-201ENSMUST00000178732 841 ntBASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.45□□□□□ -0.1
Scn1aA2APX8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.45□□□□□ -0.1
Scn1aA2APX8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.45□□□□□ -0.1
Scn1aA2APX8 Gm5035-201ENSMUST00000215581 927 ntBASIC14.45□□□□□ -0.1
Scn1aA2APX8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1aA2APX8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.44□□□□□ -0.1
Scn1aA2APX8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.44□□□□□ -0.1
Scn1aA2APX8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.44□□□□□ -0.1
Scn1aA2APX8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Gm5161-201ENSMUST00000075243 853 ntBASIC14.44□□□□□ -0.1
Scn1aA2APX8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Scn1aA2APX8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Gm17330-201ENSMUST00000221047 165 ntBASIC14.43□□□□□ -0.1
Scn1aA2APX8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.43□□□□□ -0.1
Scn1aA2APX8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms