Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Gm18027-201ENSMUST00000218947 619 ntBASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-1A0N8R1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-1A0N8R1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-1A0N8R1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-1A0N8R1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-1A0N8R1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-1A0N8R1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-1A0N8R1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms