Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gm12882-201ENSMUST00000121696 517 ntBASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gm43514-201ENSMUST00000198852 424 ntBASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5-4A0A075B652 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Mir1895-201ENSMUST00000122615 79 ntBASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5-4A0A075B652 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Gm18889-201ENSMUST00000174284 929 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms