Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.43□□□□□ -0.42
Cldn13Q9Z0S4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Gm14767-201ENSMUST00000121559 586 ntBASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Gm44344-201ENSMUST00000200287 129 ntBASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Gm16476-201ENSMUST00000221544 139 ntBASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn13Q9Z0S4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Gm12428-201ENSMUST00000119844 727 ntBASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Gm27989-201ENSMUST00000184721 107 ntBASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn13Q9Z0S4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn13Q9Z0S4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms