Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ClcnkaQ9WUB7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
ClcnkaQ9WUB7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ClcnkaQ9WUB7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.83□□□□□ -0.35
ClcnkaQ9WUB7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.83□□□□□ -0.35
ClcnkaQ9WUB7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 AA543401-201ENSMUST00000164248 1269 ntBASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Gm8584-201ENSMUST00000171982 758 ntBASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Gm16476-201ENSMUST00000221544 139 ntBASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClcnkaQ9WUB7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gm25144-201ENSMUST00000179561 110 ntBASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gm25352-201ENSMUST00000179815 110 ntBASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gm44608-201ENSMUST00000206827 855 ntBASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ClcnkaQ9WUB7 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClcnkaQ9WUB7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms