Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Gm2445-201ENSMUST00000182798 989 ntBASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf3Q9QXK7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf3Q9QXK7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf3Q9QXK7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf3Q9QXK7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms