Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm17376-201ENSMUST00000166016 84 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm2991-201ENSMUST00000173338 480 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm20482-202ENSMUST00000174729 825 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm25927-201ENSMUST00000175058 117 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm26927-201ENSMUST00000182385 965 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm37986-201ENSMUST00000193285 383 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.11□□□□□ -0.63
Crlf1Q9JM58 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm13461-201ENSMUST00000120980 662 ntBASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm13786-201ENSMUST00000122371 333 ntBASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm16505-201ENSMUST00000179981 232 ntBASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Itm2b-204ENSMUST00000228637 783 ntBASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Crlf1Q9JM58 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm5687-201ENSMUST00000118252 640 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm15782-201ENSMUST00000121073 445 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm16379-201ENSMUST00000161469 348 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm8762-201ENSMUST00000193486 339 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Crlf1Q9JM58 Gm8227-201ENSMUST00000223306 571 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms