Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Gm37722-201ENSMUST00000193757 208 ntBASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco4Q9JIS3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Smco4Q9JIS3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms