Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Rprl2-201ENSMUST00000157150 290 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm29310-201ENSMUST00000185468 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21825-201ENSMUST00000185728 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm29109-201ENSMUST00000185895 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21896-201ENSMUST00000186520 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21873-201ENSMUST00000186728 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21794-201ENSMUST00000187056 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21880-201ENSMUST00000187275 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21826-201ENSMUST00000187451 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21198-201ENSMUST00000188393 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21749-201ENSMUST00000189343 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21901-201ENSMUST00000189568 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm29424-201ENSMUST00000189716 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm28599-201ENSMUST00000189838 694 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21867-201ENSMUST00000189917 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm29269-201ENSMUST00000190087 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21722-201ENSMUST00000190153 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm28423-201ENSMUST00000190701 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21899-201ENSMUST00000190745 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21910-201ENSMUST00000191163 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21849-201ENSMUST00000191571 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm28678-201ENSMUST00000191593 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm20910-201ENSMUST00000193268 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm21871-201ENSMUST00000194621 696 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gm25911-201ENSMUST00000157621 56 ntBASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl28Q9JIL2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms