Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Praf2Q9JIG8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.32□□□□□ -0.44
Praf2Q9JIG8 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Praf2Q9JIG8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Gm44719-201ENSMUST00000206404 149 ntBASIC12.31□□□□□ -0.44
Praf2Q9JIG8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Praf2Q9JIG8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms