Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpxQ9JHS4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Gm10154-201ENSMUST00000084445 354 ntBASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpxQ9JHS4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpxQ9JHS4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Gm17968-201ENSMUST00000194902 784 ntBASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpxQ9JHS4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms