Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.26■□□□□ 0.03
Rsph3bQ9DA80 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph3bQ9DA80 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Rsph3bQ9DA80 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph3bQ9DA80 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Gm18307-201ENSMUST00000206864 949 ntBASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph3bQ9DA80 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Gm13385-201ENSMUST00000121089 220 ntBASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph3bQ9DA80 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm15240-201ENSMUST00000118156 720 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm8927-201ENSMUST00000181978 981 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm8602-201ENSMUST00000184045 607 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm3222-201ENSMUST00000071282 990 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rsph3bQ9DA80 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms