Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp4cQ9D7F7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chmp4cQ9D7F7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Chmp4cQ9D7F7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chmp4cQ9D7F7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp4cQ9D7F7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp4cQ9D7F7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm43125-201ENSMUST00000201724 730 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms