Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chaf1bQ9D0N7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chaf1bQ9D0N7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chaf1bQ9D0N7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Chaf1bQ9D0N7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chaf1bQ9D0N7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chaf1bQ9D0N7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm27301-201ENSMUST00000184012 127 ntBASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm5864-201ENSMUST00000202263 970 ntBASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Thap2-203ENSMUST00000218989 527 ntBASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chaf1bQ9D0N7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chaf1bQ9D0N7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Gm9385-201ENSMUST00000117563 472 ntBASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms