Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssbp3Q9D032 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.61□□□□□ -0.55
Ssbp3Q9D032 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssbp3Q9D032 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm4804-201ENSMUST00000182234 999 ntBASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm21470-201ENSMUST00000187680 696 ntBASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm5425-201ENSMUST00000214125 459 ntBASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Acot6-202ENSMUST00000222921 3622 ntBASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.6□□□□□ -0.55
Ssbp3Q9D032 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms