Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm21198-201ENSMUST00000188393 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21749-201ENSMUST00000189343 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21901-201ENSMUST00000189568 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm29424-201ENSMUST00000189716 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm28599-201ENSMUST00000189838 694 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21867-201ENSMUST00000189917 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm29269-201ENSMUST00000190087 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21722-201ENSMUST00000190153 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm28423-201ENSMUST00000190701 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21899-201ENSMUST00000190745 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21910-201ENSMUST00000191163 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21849-201ENSMUST00000191571 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm28678-201ENSMUST00000191593 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm20910-201ENSMUST00000193268 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm21871-201ENSMUST00000194621 696 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 AW822252-206ENSMUST00000208904 237 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snf8Q9CZ28 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snf8Q9CZ28 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.3□□□□□ -0.12
Snf8Q9CZ28 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms