Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hdhd3Q9CYW4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Gm5479-201ENSMUST00000160578 435 ntBASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 AV026068-213ENSMUST00000223675 1171 ntBASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hdhd3Q9CYW4 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm13036-201ENSMUST00000117799 748 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm15483-201ENSMUST00000120338 456 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm11452-201ENSMUST00000122376 690 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gm45747-201ENSMUST00000212203 999 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Birc2-201ENSMUST00000054878 378 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hdhd3Q9CYW4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms