Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Gm8213-201ENSMUST00000118191 441 ntBASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Gm5687-201ENSMUST00000118252 640 ntBASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.22■□□□□ 0.35
Nip7Q9CXK8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.21■□□□□ 0.35
Nip7Q9CXK8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Gm18054-201ENSMUST00000207539 555 ntBASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Itm2b-204ENSMUST00000228637 783 ntBASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nip7Q9CXK8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nip7Q9CXK8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nip7Q9CXK8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Gm29608-201ENSMUST00000190444 463 ntBASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.2■□□□□ 0.34
Nip7Q9CXK8 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms