Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn1Q9CWM4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Gm8584-201ENSMUST00000171982 758 ntBASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn1Q9CWM4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms