Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smurf1Q9CUN6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smurf1Q9CUN6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smurf1Q9CUN6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Gm12350-201ENSMUST00000121208 462 ntBASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Gm45167-201ENSMUST00000208007 322 ntBASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smurf1Q9CUN6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm1401-201ENSMUST00000122048 772 ntBASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm15590-201ENSMUST00000078419 552 ntBASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smurf1Q9CUN6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Smurf1Q9CUN6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smurf1Q9CUN6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.39
Smurf1Q9CUN6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smurf1Q9CUN6 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms