Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm7Q9CQQ8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Lsm7Q9CQQ8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm7Q9CQQ8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm7Q9CQQ8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Mir698-201ENSMUST00000102164 109 ntBASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Gm18307-201ENSMUST00000206864 949 ntBASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm7Q9CQQ8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm7Q9CQQ8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lsm7Q9CQQ8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm7Q9CQQ8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms