Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.55□□□□□ -0.4
Krt88Q9CPR6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt88Q9CPR6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Gm44771-201ENSMUST00000206975 626 ntBASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt88Q9CPR6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Gm10060-201ENSMUST00000212002 111 ntBASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Thap2-203ENSMUST00000218989 527 ntBASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt88Q9CPR6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms