Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim8Q99PJ2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim8Q99PJ2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim8Q99PJ2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms