Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm28450-201ENSMUST00000187349 638 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 AU022133-201ENSMUST00000200601 873 ntBASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh15Q99PJ1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm45224-201ENSMUST00000208203 414 ntBASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdh15Q99PJ1 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gm45770-201ENSMUST00000212105 616 ntBASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms