Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gm16570-201ENSMUST00000161951 436 ntBASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gm4857-201ENSMUST00000192718 785 ntBASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gm19309-201ENSMUST00000218295 205 ntBASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx6-1Q99MA9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gm14730-201ENSMUST00000122378 1045 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gm27501-201ENSMUST00000183599 107 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gm38002-201ENSMUST00000193255 180 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gm7498-201ENSMUST00000203282 1084 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gm45930-201ENSMUST00000221330 292 ntBASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx6-1Q99MA9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms