Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Clp1Q99LI9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.59□□□□□ -0.07
Clp1Q99LI9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm26927-201ENSMUST00000182385 965 ntBASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm7783-201ENSMUST00000204795 781 ntBASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm17330-201ENSMUST00000221047 165 ntBASIC14.59□□□□□ -0.07
Clp1Q99LI9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.59□□□□□ -0.07
Clp1Q99LI9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clp1Q99LI9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Clp1Q99LI9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clp1Q99LI9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clp1Q99LI9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clp1Q99LI9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm15236-201ENSMUST00000117309 379 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm13350-201ENSMUST00000120519 479 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm7584-201ENSMUST00000175829 940 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm27243-201ENSMUST00000183964 521 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm27516-201ENSMUST00000184237 98 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.58□□□□□ -0.08
Clp1Q99LI9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms