Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.07■□□□□ 0.16
Smc1bQ920F6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.07■□□□□ 0.16
Smc1bQ920F6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc1bQ920F6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Gm12957-201ENSMUST00000117835 377 ntBASIC16.06■□□□□ 0.16
Smc1bQ920F6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.06■□□□□ 0.16
Smc1bQ920F6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Smc1bQ920F6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc1bQ920F6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms