Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Gm33320-201ENSMUST00000192232 530 ntBASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm6916-202ENSMUST00000205523 195 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha3Q91Y16 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Gm27838-201ENSMUST00000184829 128 ntBASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha3Q91Y16 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms