Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Gm18905-201ENSMUST00000205454 928 ntBASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha9Q91Y11 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha9Q91Y11 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha9Q91Y11 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Gm17795-201ENSMUST00000214505 757 ntBASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha9Q91Y11 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha9Q91Y11 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms