Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb18Q91Y02 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb18Q91Y02 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb18Q91Y02 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb18Q91Y02 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb18Q91Y02 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb18Q91Y02 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Gm18027-201ENSMUST00000218947 619 ntBASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb18Q91Y02 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm11425-201ENSMUST00000119608 498 ntBASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm17794-201ENSMUST00000220252 955 ntBASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm9396-201ENSMUST00000076703 567 ntBASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb18Q91Y02 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb18Q91Y02 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Gm9899-201ENSMUST00000065519 555 ntBASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb18Q91Y02 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms