Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.87■□□□□ 0.13
Trex1Q91XB0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Gm18473-201ENSMUST00000220543 868 ntBASIC15.87■□□□□ 0.13
Trex1Q91XB0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.87■□□□□ 0.13
Trex1Q91XB0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trex1Q91XB0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.86■□□□□ 0.13
Trex1Q91XB0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Snora78-201ENSMUST00000158630 128 ntBASIC15.86■□□□□ 0.13
Trex1Q91XB0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Gm8598-201ENSMUST00000221184 836 ntBASIC15.86■□□□□ 0.13
Trex1Q91XB0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trex1Q91XB0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.85■□□□□ 0.13
Trex1Q91XB0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Gm13392-201ENSMUST00000117708 150 ntBASIC15.85■□□□□ 0.13
Trex1Q91XB0 Gm11803-201ENSMUST00000119966 444 ntBASIC15.85■□□□□ 0.13
Trex1Q91XB0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.85■□□□□ 0.13
Trex1Q91XB0 Gm8062-201ENSMUST00000139696 444 ntBASIC15.85■□□□□ 0.13
Trex1Q91XB0 Gm37424-201ENSMUST00000191727 561 ntBASIC15.85■□□□□ 0.13
Trex1Q91XB0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trex1Q91XB0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms