Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vsx1Q91V10 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vsx1Q91V10 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.74□□□□□ -0.21
Vsx1Q91V10 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vsx1Q91V10 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vsx1Q91V10 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vsx1Q91V10 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.73□□□□□ -0.21
Vsx1Q91V10 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm43094-201ENSMUST00000196549 921 ntBASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.73□□□□□ -0.21
Vsx1Q91V10 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.73□□□□□ -0.21
Vsx1Q91V10 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm10012-201ENSMUST00000078252 192 ntBASIC13.73□□□□□ -0.21
Vsx1Q91V10 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vsx1Q91V10 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm15236-201ENSMUST00000117309 379 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm12384-201ENSMUST00000119228 919 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm15376-201ENSMUST00000122258 783 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm7584-201ENSMUST00000175829 940 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm24196-201ENSMUST00000179161 110 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm19078-201ENSMUST00000206311 727 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm45880-201ENSMUST00000213041 853 ntBASIC13.72□□□□□ -0.21
Vsx1Q91V10 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx1Q91V10 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.71□□□□□ -0.21
Vsx1Q91V10 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms