Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TraipQ8VIG6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TraipQ8VIG6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.77□□□□□ -0.04
TraipQ8VIG6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TraipQ8VIG6 Gm13689-201ENSMUST00000119360 685 ntBASIC14.77□□□□□ -0.05
TraipQ8VIG6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.77□□□□□ -0.05
TraipQ8VIG6 Gm18062-201ENSMUST00000208020 547 ntBASIC14.77□□□□□ -0.05
TraipQ8VIG6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Gm18055-201ENSMUST00000208254 547 ntBASIC14.77□□□□□ -0.05
TraipQ8VIG6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.77□□□□□ -0.05
TraipQ8VIG6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.77□□□□□ -0.05
TraipQ8VIG6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.76□□□□□ -0.05
TraipQ8VIG6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.76□□□□□ -0.05
TraipQ8VIG6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm15824-201ENSMUST00000119516 955 ntBASIC14.76□□□□□ -0.05
TraipQ8VIG6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.76□□□□□ -0.05
TraipQ8VIG6 Gm17330-201ENSMUST00000221047 165 ntBASIC14.76□□□□□ -0.05
TraipQ8VIG6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TraipQ8VIG6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms