Protein–RNA interactions for Protein: Q8VE99

Ccdc115, Coiled-coil domain-containing protein 115, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc115Q8VE99 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Gm5479-201ENSMUST00000160578 435 ntBASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Gm37230-201ENSMUST00000194491 818 ntBASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc115Q8VE99 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm15483-201ENSMUST00000120338 456 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm5364-201ENSMUST00000216789 889 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc115Q8VE99 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Gm1401-201ENSMUST00000122048 772 ntBASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Gm9727-201ENSMUST00000161387 555 ntBASIC12.18□□□□□ -0.46
Ccdc115Q8VE99 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms