Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx39aQ8VDW0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ddx39aQ8VDW0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx39aQ8VDW0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx39aQ8VDW0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx39aQ8VDW0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Gm8584-201ENSMUST00000171982 758 ntBASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Gm5356-201ENSMUST00000093326 615 ntBASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.42■□□□□ 0.06
Ddx39aQ8VDW0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx39aQ8VDW0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm15824-201ENSMUST00000119516 955 ntBASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm13829-201ENSMUST00000119600 138 ntBASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx39aQ8VDW0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms