Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubqln1Q8R317 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Gm27618-201ENSMUST00000183671 60 ntBASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Gm33320-201ENSMUST00000192232 530 ntBASIC13.21□□□□□ -0.29
Ubqln1Q8R317 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubqln1Q8R317 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ubqln1Q8R317 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gm14767-201ENSMUST00000121559 586 ntBASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.2□□□□□ -0.3
Ubqln1Q8R317 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gm18027-201ENSMUST00000218947 619 ntBASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gm9229-201ENSMUST00000222777 126 ntBASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubqln1Q8R317 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.19□□□□□ -0.3
Ubqln1Q8R317 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms