Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Treml1Q8K558 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Treml1Q8K558 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Treml1Q8K558 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Treml1Q8K558 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Treml1Q8K558 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Treml1Q8K558 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.71□□□□□ -0.21
Treml1Q8K558 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Treml1Q8K558 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Treml1Q8K558 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.71□□□□□ -0.21
Treml1Q8K558 Mir7684-201ENSMUST00000183858 60 ntBASIC13.71□□□□□ -0.21
Treml1Q8K558 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.71□□□□□ -0.21
Treml1Q8K558 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.71□□□□□ -0.21
Treml1Q8K558 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.71□□□□□ -0.21
Treml1Q8K558 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Treml1Q8K558 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Treml1Q8K558 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Treml1Q8K558 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Treml1Q8K558 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Treml1Q8K558 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Treml1Q8K558 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Treml1Q8K558 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Treml1Q8K558 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Treml1Q8K558 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Treml1Q8K558 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.7□□□□□ -0.22
Treml1Q8K558 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Treml1Q8K558 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.7□□□□□ -0.22
Treml1Q8K558 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.7□□□□□ -0.22
Treml1Q8K558 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Treml1Q8K558 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Treml1Q8K558 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.69□□□□□ -0.22
Treml1Q8K558 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Treml1Q8K558 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Treml1Q8K558 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Treml1Q8K558 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Treml1Q8K558 Syt7-204ENSMUST00000223586 1344 ntBASIC13.69□□□□□ -0.22
Treml1Q8K558 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Treml1Q8K558 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Treml1Q8K558 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Treml1Q8K558 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms