Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Gm9522-201ENSMUST00000182394 926 ntBASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sf3a1Q8K4Z5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Syt7-204ENSMUST00000223586 1344 ntBASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Gm15321-201ENSMUST00000121290 288 ntBASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Gm24694-201ENSMUST00000180054 110 ntBASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Gm27663-201ENSMUST00000184839 110 ntBASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sf3a1Q8K4Z5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sf3a1Q8K4Z5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sf3a1Q8K4Z5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sf3a1Q8K4Z5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Sf3a1Q8K4Z5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sf3a1Q8K4Z5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Sf3a1Q8K4Z5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sf3a1Q8K4Z5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Gm29741-201ENSMUST00000192667 421 ntBASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Gm20445-201ENSMUST00000061905 565 ntBASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Mir497b-201ENSMUST00000093601 125 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms