Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Gm45186-201ENSMUST00000206874 478 ntBASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx54Q8K4L0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Gm7809-201ENSMUST00000153199 742 ntBASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC18.05■□□□□ 0.48
Ddx54Q8K4L0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gm43947-201ENSMUST00000203019 959 ntBASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gm17870-201ENSMUST00000219489 1174 ntBASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx54Q8K4L0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms