Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Gm27989-201ENSMUST00000184721 107 ntBASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Mir7023-201ENSMUST00000185093 64 ntBASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf39Q8K2Z2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Mir698-201ENSMUST00000102164 109 ntBASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Mir7684-201ENSMUST00000183858 60 ntBASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf39Q8K2Z2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf39Q8K2Z2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms