Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim68Q8K243 Gm27701-201ENSMUST00000184498 110 ntBASIC15.12■□□□□ 0.01
Trim68Q8K243 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim68Q8K243 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim68Q8K243 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim68Q8K243 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.11■□□□□ 0.01
Trim68Q8K243 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Gm12341-201ENSMUST00000119724 503 ntBASIC15.11■□□□□ 0.01
Trim68Q8K243 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.11■□□□□ 0.01
Trim68Q8K243 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.11■□□□□ 0.01
Trim68Q8K243 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.11■□□□□ 0.01
Trim68Q8K243 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim68Q8K243 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.11■□□□□ 0.01
Trim68Q8K243 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim68Q8K243 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim68Q8K243 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim68Q8K243 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim68Q8K243 Gm45331-201ENSMUST00000209868 554 ntBASIC15.1■□□□□ 0.01
Trim68Q8K243 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim68Q8K243 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim68Q8K243 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim68Q8K243 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim68Q8K243 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.09■□□□□ 0.01
Trim68Q8K243 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim68Q8K243 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim68Q8K243 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim68Q8K243 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim68Q8K243 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Trim68Q8K243 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim68Q8K243 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim68Q8K243 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms