Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Gm13385-201ENSMUST00000121089 220 ntBASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Gm27838-201ENSMUST00000184829 128 ntBASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn1Q8K0T0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm14719-201ENSMUST00000121891 340 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm8927-201ENSMUST00000181978 981 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm9522-201ENSMUST00000182394 926 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm29667-201ENSMUST00000190817 490 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm10576-201ENSMUST00000191927 825 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn1Q8K0T0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms