Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne4Q8CII8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne4Q8CII8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne4Q8CII8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Syne4Q8CII8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Gm18935-201ENSMUST00000212692 664 ntBASIC15.65■□□□□ 0.1
Syne4Q8CII8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.65■□□□□ 0.1
Syne4Q8CII8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne4Q8CII8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Syne4Q8CII8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.64■□□□□ 0.1
Syne4Q8CII8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Gm29608-201ENSMUST00000190444 463 ntBASIC15.64■□□□□ 0.09
Syne4Q8CII8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.64■□□□□ 0.09
Syne4Q8CII8 Gm26315-201ENSMUST00000083890 321 ntBASIC15.64■□□□□ 0.09
Syne4Q8CII8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Syne4Q8CII8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Gm37466-201ENSMUST00000195692 652 ntBASIC15.63■□□□□ 0.09
Syne4Q8CII8 Gm43758-201ENSMUST00000199500 367 ntBASIC15.63■□□□□ 0.09
Syne4Q8CII8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Syne4Q8CII8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Gm43133-201ENSMUST00000197472 463 ntBASIC15.62■□□□□ 0.09
Syne4Q8CII8 Gm9368-201ENSMUST00000219348 831 ntBASIC15.62■□□□□ 0.09
Syne4Q8CII8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms