Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gm15678-201ENSMUST00000117573 960 ntBASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox30Q8CGW4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Gm18889-201ENSMUST00000174284 929 ntBASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox30Q8CGW4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Gm6916-202ENSMUST00000205523 195 ntBASIC15.17■□□□□ 0.02
Sox30Q8CGW4 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox30Q8CGW4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox30Q8CGW4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox30Q8CGW4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox30Q8CGW4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms