Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps53Q8CCB4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps53Q8CCB4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps53Q8CCB4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Gm29667-201ENSMUST00000190817 490 ntBASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Gm43433-201ENSMUST00000196573 481 ntBASIC16.19■□□□□ 0.18
Vps53Q8CCB4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps53Q8CCB4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vps53Q8CCB4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps53Q8CCB4 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gm15653-201ENSMUST00000119247 907 ntBASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Mir1897-201ENSMUST00000122581 272 ntBASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms